Coffee Filter-Like Material Helps Scientists Crack Zika’s Genetic Code

On March 2, 2015, Brazilian authorities put in a call to World Health Organization officials. Doctors in the country’s northeastern states had reported thousands of cases of an unidentified illness with a characteristic skin rash, some with fever and some without. National labs had analyzed blood samples from a number of patients, and only a tiny portion came back positive for dengue, a mosquito-borne virus that elicits similar symptoms. Subsequent tests for other suspects—chikungunya, enterovirus, measles, rubella and parvovirus B19—were all negative.
 
It was enough to make even a jaded epidemiologist raise an eyebrow. Was there a new microscopic predator hunting in South America’s most populated country? The answer came quickly. On April 29, a state lab confirmed 16 cases of Zika infection, the first known local acquisition and transmission of the virus in the Americas. Previously seen only in Africa and Asia, the flavivirus first discovered in a Ugandan forest in 1947 had finally reached the New World.
 
Basic and medical research still must answer many of the most fundamental questions relating to Zika, and work is happening in earnest both in the Americas where the latest outbreak is centered and in other parts of the world. But support for ongoing science and public health response is also coming from some unlikely places. One is more than 5,000 miles from the shores of Brazil in Cardiff, Wales.
 
It’s there, on a 30-acre site set along the River Taff and sandwiched between two golf clubs, a steady stream of basic tools stream out every day from a GE Healthcare facility to feed the needs of the modern life sciences. Researchers uncovering how Zika works get from the facility chemicals that help them isolate and analyze the virus’s RNA blueprints.
 
Just 10 months later the virus had spread to 31 countries and territories by catching a lift on the Aedes aegypti mosquito, the same species that transmits dengue fever and other tropical diseases, and through sex. It may have infected over a million people in the region, though many may not have reported it because associated symptoms of fever, rash and pink eye are mild or nonexistent. But other worrying symptoms—that the virus might be linked to a birth defect of incomplete brain development called microcephaly and adult-onset Guillain–Barré syndrome, where the immune system attacks the nervous system—led the WHO to declare a public health emergency of international concern.
 
“The more we know the worse things look,” said Dr. Margaret Chan, WHO’s director-general. “A pattern has emerged in which initial detection of virus circulation is followed, within about three weeks, by an unusual increase in cases of Guillain-Barré syndrome. Detection of microcephaly and other fetal malformations comes later, as pregnancies of infected women come to term.”
 
As of June 1, 60 countries and territories were still reporting ongoing Zika transmission. Eleven countries or territories worldwide had reported cases of microcephaly or other central nervous system malformations, and 13 had reported increased rates of Guillain–Barré syndrome. “At this stage, based on the evidence available, WHO does not see an overall decline in the outbreak,” the organization said in its most recent situation report.
 
Nobody has yet developed a vaccine to prevent infection or a cure once the virus has been transmitted to a person. To date, efforts to stop it have focused on educational campaigns for people in areas where the mosquito carrier lives instructing them to wear insect repellent, put up window screens and remove standing water from around their homes. Other efforts involve mosquito-limiting efforts such as spraying and experimental population control.
 
The most high-tech methods focus on targeting Zika’s genetic materials. Scientists in the field collecting mosquito samples use a special fiber paper manufactured by GE in Cardiff. This coffee-filter-like material, called Whatman FTA paper, has magical properties if you’re a microbiologist. It is chemically treated to break down cells and destroy proteins that would otherwise damage the DNA that sticks to its fibers. The result: Squishing a mosquito in the paper lets researchers transport samples without refrigeration over long distances, a requirement if you happen to be in the middle of the Amazon.
 
Identifying patients who have been infected with the virus is a difficult process only recently made possible by modern technology. One method, called the polymerase chain reaction PCR), rapidly produces multiple copies of the virus’s RNA so that medical workers can identify it in a patient’s blood. The Cardiff facility produces PCR beads that Zika researchers with the U.S. Army are using to study infection.
 
Much still needs to be done to contain and then eradicate the Zika epidemic. Rapid diagnostic tools are being developed on a massive scale, as are potential vaccines. All will take time. But for many at the GE Healthcare Cardiff facility, contributing their labor to help end the disease brings a sense of pride to often seemingly mundane work.
 
“For the people making and boxing the papers, PCR beads and other lab consumables, these products might not normally look like much more than water in a tube or coffee filters,” said Michael Igoe, the site’s product operations manager. “But hidden in the tube and the paper are complex products that are providing a huge benefit to communities. We’re making products that make a real difference in the world. They have meaning.”

This article originally appeared in GE Reports.